So I sprayed out the hole with some compressed air and wiped out with a Q-tip, then tried to thread the bolt again. It started out a little better and threaded in farther, but it still wasn't right. This time the bolt got stuck in the nut and trying to back it out just spins the nut in the carbon fiber. I had to take off the tail light to get vice grips onto the back side of the nut to hold it so I could back the bolt out. The bolt eventually just broke off inside the nut, thankfully the bolt doesn't stick out. I'm not sure it matters. There are 6 bolts on the drivers side and now 5 on the passenger side which I think will be enough to hold a cover in place. I'm probably going to get a Bak Flip MX4.